BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035E10LP1|AL430072
(921 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1302 1761 0.0
3x_Contig1399 150 4e-36
>3x_Contig1302
Length = 5215
Score = 1761 bits (878), Expect = 0.0
Identities = 904/922 (98%), Gaps = 1/922 (0%)
Strand = Plus / Plus
Query: 1 gatcaataaaacacaaatatcaagtgatatccctggttagcagaaaattccaattgaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 gatcaataaaacacaaatatcaagtgatatccctggttagcagaaaattccaattgaata 711
Query: 61 caccgaagtttgaagatatggggaagggctcgttcgcctttttttgggagcaattcaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 caccgaagtttgaagatatggggaagggctcgttcgcctttttttgggagcaattcaaga 771
Query: 121 acaactttacatgataaagctttgttccaacttttgaccctttttaatctccggattttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 acaactttacatgataaagctttgttccaacttttgaccctttttaatctccggattttt 831
Query: 181 ataaatttgacattgacaatagcttttaatgattaamggtctttaaaaaaataacaaaag 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 832 ataaatttgacattgacaatagcttttaatgattaaaggtctttaaaaaaataacaaaag 891
Query: 241 tgaaagatgaccaaaaacggacagagaacagaataatcataaaaccattatatatacyat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 892 tgaaagatgaccaaaaacggacagagaacagaataatcataaaaccattatatatactat 951
Query: 301 atgcgctccccctacattatacattttcgacattgtcatccgacgttgttactagtaggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952 atgcgctccccctacattatacattttcgacattgtcatccgacgttgttactagtaggg 1011
Query: 361 agaaagatgctgtataataatataammmagaatgttataacagtagatatagatgttaaa 420
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1012 agaaagatgctgtataataatataaaaaagaatgttataacagtagatatagatgttaaa 1071
Query: 421 aagatactatgttagttgcmatccagcagaactagataaatatcgttaaamactttcatc 480
||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 1072 aagatactatgttagttgcaatccagcagaactagataaatatcgttaaaaactttcatc 1131
Query: 481 aattcatgatatgtgatcattaactaamaggccgaa-gaataatatgggataagagattg 539
||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 1132 aattcatgatatgtgatcattaactaaaaggccgaaggaataatatgggataagagattg 1191
Query: 540 gvaggaaggaaaammaamagataatatttttggcagtcactgtmaatyataatmacagac 599
| ||||||||||| || ||||||||||||||||||| ||||| ||| ||||| ||||||
Sbjct: 1192 gaaggaaggaaaaaaaaaagataatatttttggcagtaactgtaaattataataacagac 1251
Query: 600 tgatcttaccccaaatgacttatccgtctagttggaggtgtcaacaacgtatctacccaa 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1252 tgatcttaccccaaatgacttatccgtctagttggaggtgtcaacaacgtatctacccaa 1311
Query: 660 matcttaccttgttccatcaattcgtaaacctttggtagttcggacaaaccaacaacctt 719
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1312 aatcttaccttgttccatcaattcgtaaacctttggtagttcggacaaaccaacaacctt 1371
Query: 720 gattggagagtggacgtgaccgttagcgaagaagttgatagcttctctggtgtcagctct 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1372 gattggagagtggacgtgaccgttagcgaagaagttgatagcttctctggtgtcagctct 1431
Query: 780 gttaccgacgtaagaacccttgatgttaatagacttaacgacgtgggagaagacttcgga 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1432 gttaccgacgtaagaacccttgatgttaatagacttaacgacgtgggagaagacttcgga 1491
Query: 840 cttgatgacggcaccagctggcaaaccgaccaatacgacagtaccagttggtctgacgaa 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1492 cttgatgacggcaccagctggcaaaccgaccaatacgacagtaccagttggtctgacgaa 1551
Query: 900 ttgagtggaagcgttcatggca 921
||||||||||||||||||||||
Sbjct: 1552 ttgagtggaagcgttcatggca 1573
>3x_Contig1399
Length = 7157
Score = 150 bits (75), Expect = 4e-36
Identities = 129/147 (87%)
Strand = Plus / Minus
Query: 747 gaagaagttgatagcttctctggtgtcagctctgttaccgacgtaagaacccttgatgtt 806
|||||||| | | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 gaagaagtcggtggcttctctggtgtcagctctgttaccgacgtaagaacccttgatgga 428
Query: 807 aatagacttaacgacgtgggagaagacttcggacttgatgacggcaccagctggcaaacc 866
|| |||||||||||||||||||||||||||||||||| | || |||||||||||||
Sbjct: 427 gatggacttaacgacgtgggagaagacttcggacttgacgtaagcgtcagctggcaaacc 368
Query: 867 gaccaatacgacagtaccagttggtct 893
|||||| || ||| ||| ||||||||
Sbjct: 367 gaccaagacaacaacaccggttggtct 341
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6651
Number of Sequences: 1807
Number of extensions: 6651
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 2
length of query: 921
length of database: 10,358,551
effective HSP length: 16
effective length of query: 905
effective length of database: 10,329,639
effective search space: 9348323295
effective search space used: 9348323295
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.8 bits)